Gene detail information of Glyur003764s00041076.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34300.16.00E-86lectin protein kinase family protein
NRXP_003529974.20PREDICTED: putative receptor protein kinase ZmPK1-like [Glycine max]
COGYP_003797670.12.00E-23putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprottr|P17801|KPRO_MAIZE0Putative receptor protein kinase ZmPK1 (Precursor)
trEMBLtr|I1KIJ6|I1KIJ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G08780.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0376436966092+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003764s00041076.1PF01453.19B_lectin671659.60E-26
Glyur003764s00041076.1PF00954.15S_locus_glycop2283091.00E-05
Glyur003764s00041076.1PF00069.20Pkinase5177892.40E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.579
SRR1783600control2.593
SRR1783602moderate drought stress1.557
SRR1811619moderate drought stress1.446

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.982
DRR006520Root Summer glycyrrhizin high producing strain28.829
DRR006521Root Winter glycyrrhizin high producing strain3.788
DRR006522Root Winter glycyrrhizin high producing strain3.439
DRR006523Root Summer glycyrrhizin low producing strain24.212
DRR006524Root Summer glycyrrhizin low producing strain24.632
DRR006525Leaf Summer glycyrrhizin high producing strain20.805
DRR006526Leaf Summer glycyrrhizin high producing strain20.704

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.765
SRR2868004Drought Stress(Tissue:root)18.860
SRR2967015Control (Tissue:root)35.290

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.312
SRR9715740Leave32.094
SRR9715741Leave39.748
SRR9715739Root1.898
SRR9715742Root11.066
SRR9715743Root8.359

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.810
SRR8749028MeJA induced 9h26.320
SRR8749029MeJA induced 9h17.195
SRR8749030Uninduced28.505
SRR8749031Uninduced43.451
SRR8749032Uninduced33.756

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.040
SRR8400027Control-Root5.142

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved