Gene detail information of Glyur003779s00040560.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04510.13.00E-1733'-phosphoinositide-dependent protein kinase 1
NRXP_004496160.10PREDICTED: 3-phosphoinositide-dependent protein kinase 1-like isoform X2 [Cicer arietinum]
COGYP_003114023.14.00E-22serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprottr|Q9XF67|PDPK1_ARATH03-phosphoinositide-dependent protein kinase 1
trEMBLtr|A0A072VPR7|A0A072VPR7_MEDTR03-phosphoinositide-dependent kinase {ECO:0000313|EMBL:KEH43368.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold037791336816786+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06276PDPK1 EC:2.7.11.1 MAPK signaling pathway - yeast map04011
FoxO signaling pathwaymap04068
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Apoptosismap04210
Focal adhesionmap04510
T cell receptor signaling pathwaymap04660
Fc epsilon RI signaling pathwaymap04664
Insulin signaling pathwaymap04910
PPAR signaling pathwaymap03320
Thyroid hormone signaling pathwaymap04919
Aldosterone-regulated sodium reabsorptionmap04960
Neurotrophin signaling pathwaymap04722
Choline metabolism in cancermap05231
Proteoglycans in cancermap05205
Prostate cancermap05215
Endometrial cancermap05213
Non-small cell lung cancermap05223
Insulin resistancemap04931
Hepatitis Cmap05160
Toxoplasmosismap05145
Platinum drug resistancemap01524


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003779s00040560.1PF00069.20Pkinase31832.70E-42
Glyur003779s00040560.1PF14593.1PH_32593619.60E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.390
SRR1783600control12.037
SRR1783602moderate drought stress7.814
SRR1811619moderate drought stress7.910

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.493
DRR006520Root Summer glycyrrhizin high producing strain22.211
DRR006521Root Winter glycyrrhizin high producing strain8.571
DRR006522Root Winter glycyrrhizin high producing strain8.357
DRR006523Root Summer glycyrrhizin low producing strain18.850
DRR006524Root Summer glycyrrhizin low producing strain19.232
DRR006525Leaf Summer glycyrrhizin high producing strain8.712
DRR006526Leaf Summer glycyrrhizin high producing strain9.097

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.209
SRR2868004Drought Stress(Tissue:root)29.213
SRR2967015Control (Tissue:root)28.353

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.671
SRR9715740Leave12.049
SRR9715741Leave16.814
SRR9715739Root2.988
SRR9715742Root12.162
SRR9715743Root11.781

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.984
SRR8749028MeJA induced 9h14.619
SRR8749029MeJA induced 9h16.835
SRR8749030Uninduced8.934
SRR8749031Uninduced7.406
SRR8749032Uninduced9.265

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.346
SRR8400027Control-Root36.648

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved