Gene detail information of Glyur003873s00040417.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03873 | 11367 | 16802 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13412 | CPK | EC:2.7.11.1 | Plant-pathogen interaction | map04626 |
| Toxoplasmosis | map05145 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.197 |
| SRR1783600 | control | 0.717 |
| SRR1783602 | moderate drought stress | 0.426 |
| SRR1811619 | moderate drought stress | 0.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.049 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.189 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.124 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.119 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.132 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.418 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.607 |
| SRR2967015 | Control (Tissue:root) | 0.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.690 |
| SRR9715740 | Leave | 1.753 |
| SRR9715741 | Leave | 0.835 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.068 |
| SRR9715743 | Root | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.149 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.401 |
| SRR8400027 | Control-Root | 0.355 |