Gene detail information of Glyur004096s00043836.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38260.11.00E-94Protein kinase superfamily protein
NRXP_004498418.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum]
COGYP_001958461.19.00E-27hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH2.00E-96Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|A0A072VQB2|A0A072VQB2_MEDTR0Stress-induced receptor-like kinase {ECO:0000313|EMBL:KEH40315.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold04096660414304-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004096s00043836.1PF13947.1GUB_WAK_bind381038.00E-07
Glyur004096s00043836.1PF00069.20Pkinase4016667.40E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.234
SRR1783600control0.251
SRR1783602moderate drought stress0.143
SRR1811619moderate drought stress0.116

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.201
DRR006520Root Summer glycyrrhizin high producing strain0.176
DRR006521Root Winter glycyrrhizin high producing strain0.052
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.155
DRR006524Root Summer glycyrrhizin low producing strain0.155
DRR006525Leaf Summer glycyrrhizin high producing strain5.885
DRR006526Leaf Summer glycyrrhizin high producing strain6.013

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.085
SRR2868004Drought Stress(Tissue:root)0.167
SRR2967015Control (Tissue:root)0.344

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.885
SRR9715740Leave32.456
SRR9715741Leave13.602
SRR9715739Root0.555
SRR9715742Root1.215
SRR9715743Root1.085

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.101
SRR8749031Uninduced0.000
SRR8749032Uninduced0.013

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.141
SRR8400027Control-Root0.218

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved