Gene detail information of Glyur004096s00043837.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66920.26.00E-47Protein kinase superfamily protein
NRKEH40361.10receptor-like kinase [Medicago truncatula]
COGYP_001958461.12.00E-18hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH3.00E-50Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|A0A072VFM0|A0A072VFM0_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH40361.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold040961623517584+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004096s00043837.1PF07714.12Pkinase_Tyr2594022.90E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.236
SRR1783600control0.167
SRR1783602moderate drought stress0.283
SRR1811619moderate drought stress0.185

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.089
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain2.142
DRR006526Leaf Summer glycyrrhizin high producing strain1.774

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.070
SRR2868004Drought Stress(Tissue:root)0.020
SRR2967015Control (Tissue:root)0.232

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.860
SRR9715740Leave18.830
SRR9715741Leave10.126
SRR9715739Root0.331
SRR9715742Root0.759
SRR9715743Root0.326

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.355
SRR8400027Control-Root0.358

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved