Gene detail information of Glyur004975s00046550.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66920.16.00E-60Protein kinase superfamily protein
NRAES59881.20receptor-like kinase [Medicago truncatula]
COGYP_001958461.14.00E-21hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|D7SFH9|GPDL2_ARATH1.00E-59Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBLtr|G7I961|G7I961_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES59881.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0497512127-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004975s00046550.1PF13947.1GUB_WAK_bind17864.50E-09
Glyur004975s00046550.1PF00069.20Pkinase2794301.60E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.277
SRR1783600control0.385
SRR1783602moderate drought stress0.058
SRR1811619moderate drought stress0.152

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.164
DRR006520Root Summer glycyrrhizin high producing strain0.162
DRR006521Root Winter glycyrrhizin high producing strain0.084
DRR006522Root Winter glycyrrhizin high producing strain0.082
DRR006523Root Summer glycyrrhizin low producing strain1.517
DRR006524Root Summer glycyrrhizin low producing strain1.348
DRR006525Leaf Summer glycyrrhizin high producing strain57.362
DRR006526Leaf Summer glycyrrhizin high producing strain57.185

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.969
SRR2868004Drought Stress(Tissue:root)1.862
SRR2967015Control (Tissue:root)1.083

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.619
SRR9715740Leave121.658
SRR9715741Leave106.699
SRR9715739Root0.260
SRR9715742Root1.527
SRR9715743Root1.271

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.572
SRR8749028MeJA induced 9h13.844
SRR8749029MeJA induced 9h4.174
SRR8749030Uninduced0.962
SRR8749031Uninduced0.889
SRR8749032Uninduced0.696

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.630
SRR8400027Control-Root1.121

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved