Gene detail information of Glyur006703s00045321.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66920.23.00E-102Protein kinase superfamily protein
NRAES59881.20receptor-like kinase [Medicago truncatula]
COGYP_001958461.11.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH9.00E-105Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|G7I961|G7I961_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES59881.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0670313340-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006703s00045321.1PF13947.1GUB_WAK_bind341035.00E-07
Glyur006703s00045321.1PF00069.20Pkinase3115763.60E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.168
SRR1783600control0.075
SRR1783602moderate drought stress0.062
SRR1811619moderate drought stress0.060

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.029
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.020
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.968
DRR006524Root Summer glycyrrhizin low producing strain2.067
DRR006525Leaf Summer glycyrrhizin high producing strain57.262
DRR006526Leaf Summer glycyrrhizin high producing strain55.988

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.853
SRR2868004Drought Stress(Tissue:root)8.657
SRR2967015Control (Tissue:root)3.287

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.182
SRR9715740Leave8.822
SRR9715741Leave22.623
SRR9715739Root0.000
SRR9715742Root0.581
SRR9715743Root0.866

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.605
SRR8749028MeJA induced 9h6.053
SRR8749029MeJA induced 9h1.230
SRR8749030Uninduced0.545
SRR8749031Uninduced0.163
SRR8749032Uninduced0.240

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.309
SRR8400027Control-Root0.462

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved