Gene detail information of Glyur012331s00046609.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35790.3 | 1.00E-45 | phospholipase D delta |
| NR | KHN35993.1 | 2.20E-58 | Phospholipase D delta [Glycine soja] |
| Swissprot | tr|Q9C5Y0|PLDD1_ARATH | 2.00E-52 | Phospholipase D delta |
| trEMBL | tr|I1LI59|I1LI59_SOYBN | 1.00E-58 | Phospholipase D {ECO:0000256|PIRNR:PIRNR036470} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold12331 | 191 | 965 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.599 |
| SRR1783600 | control | 15.646 |
| SRR1783602 | moderate drought stress | 13.701 |
| SRR1811619 | moderate drought stress | 13.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.916 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.052 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.918 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.411 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.528 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.116 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 18.620 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.299 |
| SRR2967015 | Control (Tissue:root) | 9.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.312 |
| SRR9715740 | Leave | 7.593 |
| SRR9715741 | Leave | 5.479 |
| SRR9715739 | Root | 3.435 |
| SRR9715742 | Root | 10.302 |
| SRR9715743 | Root | 10.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.042 |
| SRR8749028 | MeJA induced 9h | 22.140 |
| SRR8749029 | MeJA induced 9h | 39.773 |
| SRR8749030 | Uninduced | 6.630 |
| SRR8749031 | Uninduced | 11.417 |
| SRR8749032 | Uninduced | 22.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.195 |
| SRR8400027 | Control-Root | 14.961 |