Gene detail information of Glyur000268s00013357.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G07880.22.00E-179Protein kinase superfamily protein
NRXP_004505940.10PREDICTED: mitogen-activated protein kinase homolog NTF6-like [Cicer arietinum]
COGNP_865088.16.00E-25serine/threonine protein kinase [Rhodopirellula baltica SH 1]
Swissprottr|Q40531|NTF6_TOBAC0Mitogen-activated protein kinase homolog NTF6
trEMBLtr|V7AJ95|V7AJ95_PHAVU0Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002681722319982+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04371MAPK1_3 EC:2.7.11.24 Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
MAPK signaling pathwaymap04010
MAPK signaling pathway - flymap04013
MAPK signaling pathway - yeastmap04011
ErbB signaling pathwaymap04012
TGF-beta signaling pathwaymap04350
VEGF signaling pathwaymap04370
TNF signaling pathwaymap04668
HIF-1 signaling pathwaymap04066
FoxO signaling pathwaymap04068
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
cGMP - PKG signaling pathwaymap04022
PI3K-Akt signaling pathwaymap04151
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Oocyte meiosismap04114
Apoptosismap04210
Apoptosis - flymap04214
Focal adhesionmap04510
Adherens junctionmap04520
Gap junctionmap04540
Signaling pathways regulating pluripotency of stem cellsmap04550
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Toll-like receptor signaling pathwaymap04620
NOD-like receptor signaling pathwaymap04621
Natural killer cell mediated cytotoxicitymap04650
T cell receptor signaling pathwaymap04660
Th1 and Th2 cell differentiationmap04658
Th17 cell differentiationmap04659
IL-17 signaling pathwaymap04657
B cell receptor signaling pathwaymap04662
Fc epsilon RI signaling pathwaymap04664
Fc gamma R-mediated phagocytosismap04666
Chemokine signaling pathwaymap04062
Insulin signaling pathwaymap04910
GnRH signaling pathwaymap04912
Estrogen signaling pathwaymap04915
Progesterone-mediated oocyte maturationmap04914
Prolactin signaling pathwaymap04917
Oxytocin signaling pathwaymap04921
Thyroid hormone signaling pathwaymap04919
Melanogenesismap04916
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Aldosterone-regulated sodium reabsorptionmap04960
Glutamatergic synapsemap04724
Cholinergic synapsemap04725
Serotonergic synapsemap04726
Long-term potentiationmap04720
Long-term depressionmap04730
Retrograde endocannabinoid signalingmap04723
Neurotrophin signaling pathwaymap04722
Dorso-ventral axis formationmap04320
Axon guidancemap04360
Osteoclast differentiationmap04380
Circadian entrainmentmap04713
Pathways in cancermap05200
Central carbon metabolism in cancermap05230
Choline metabolism in cancermap05231
Proteoglycans in cancermap05205
Viral carcinogenesismap05203
Colorectal cancermap05210
Pancreatic cancermap05212
Gliomamap05214
Thyroid cancermap05216
Acute myeloid leukemiamap05221
Chronic myeloid leukemiamap05220
Melanomamap05218
Renal cell carcinomamap05211
Bladder cancermap05219
Prostate cancermap05215
Endometrial cancermap05213
Breast cancermap05224
Non-small cell lung cancermap05223
Alzheimer's diseasemap05010
Prion diseasesmap05020
Alcoholismmap05034
Type II diabetes mellitusmap04930
AGE-RAGE signaling pathway in diabetic complicationsmap04933
Salmonella infectionmap05132
Shigellosismap05131
Pertussismap05133
Tuberculosismap05152
Influenza Amap05164
Hepatitis Bmap05161
Hepatitis Cmap05160
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142
EGFR tyrosine kinase inhibitor resistancemap01521
Endocrine resistancemap01522
Platinum drug resistancemap01524


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004707  MAP kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000268s00013357.1PF00069.20Pkinase433256.40E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.204
SRR1783600control29.555
SRR1783602moderate drought stress30.756
SRR1811619moderate drought stress30.749

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.407
DRR006520Root Summer glycyrrhizin high producing strain30.275
DRR006521Root Winter glycyrrhizin high producing strain28.254
DRR006522Root Winter glycyrrhizin high producing strain27.015
DRR006523Root Summer glycyrrhizin low producing strain34.889
DRR006524Root Summer glycyrrhizin low producing strain34.558
DRR006525Leaf Summer glycyrrhizin high producing strain16.446
DRR006526Leaf Summer glycyrrhizin high producing strain16.510

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.266
SRR2868004Drought Stress(Tissue:root)96.397
SRR2967015Control (Tissue:root)77.693

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.600
SRR9715740Leave49.545
SRR9715741Leave50.146
SRR9715739Root18.824
SRR9715742Root28.241
SRR9715743Root26.239

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h144.949
SRR8749028MeJA induced 9h194.507
SRR8749029MeJA induced 9h163.478
SRR8749030Uninduced70.258
SRR8749031Uninduced98.013
SRR8749032Uninduced52.194

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.061
SRR8400027Control-Root26.394

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved