Enzyme information

RNA degradation

Genes KO Enzyme Enzyme ID Annotation Best Hit
Glyur001376s00030055.1 K12585 DIS3, RRP44 EC:3.1.13.- exosome complex exonuclease DIS3/RRP44 AT2G17510.1
Glyur005579s00041505.1 K12585 DIS3, RRP44 EC:3.1.13.- exosome complex exonuclease DIS3/RRP44 AT2G17510.1
Glyur005579s00041505.2 K12585 DIS3, RRP44 EC:3.1.13.- exosome complex exonuclease DIS3/RRP44 AT2G17510.1
Glyur000255s00016812.1 K12591 RRP6, EXOSC10 EC:3.1.13.- exosome complex exonuclease RRP6 AT5G35910.1
Glyur001738s00030226.1 K12591 RRP6, EXOSC10 EC:3.1.13.- exosome complex exonuclease RRP6 AT5G35910.1
Glyur000525s00018816.1 K03514 PAPD5_7, TRF4 EC:2.7.7.19 non-canonical poly(A) RNA polymerase PAPD5/7 AT5G53770.1
Glyur000251s00019370.1 K12598 MTR4, SKIV2L2 EC:3.6.4.13 ATP-dependent RNA helicase DOB1 AT1G59760.1
Glyur000846s00019250.1 K12598 MTR4, SKIV2L2 EC:3.6.4.13 ATP-dependent RNA helicase DOB1 AT2G06990.1
Glyur000846s00019250.2 K12598 MTR4, SKIV2L2 EC:3.6.4.13 ATP-dependent RNA helicase DOB1 AT2G06990.1
Glyur000027s00001592.1 K12599 SKI2, SKIV2L EC:3.6.4.- antiviral helicase SKI2 AT3G46960.1
Glyur001943s00040961.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6
Glyur000156s00011978.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT3G58560.1
Glyur000114s00010457.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT1G31500.1
Glyur003505s00041993.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT1G31500.3
Glyur003505s00041993.2 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT1G31500.4
Glyur001106s00033797.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT3G58580.1
Glyur003799s00036830.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT1G31500.1
Glyur003799s00036830.2 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT1G31500.1
Glyur000593s00016418.1 K12603 CNOT6, CCR4 EC:3.1.13.4 CCR4-NOT transcription complex subunit 6 AT3G58580.1
Glyur000277s00017310.1 K10643 CNOT4, NOT4, MOT2 EC:2.3.2.27 CCR4-NOT transcription complex subunit 4 AT3G45630.1
Glyur002029s00034003.2 K10643 CNOT4, NOT4, MOT2 EC:2.3.2.27 CCR4-NOT transcription complex subunit 4 AT5G60170.2
Glyur000273s00014670.1 K10643 CNOT4, NOT4, MOT2 EC:2.3.2.27 CCR4-NOT transcription complex subunit 4 AT5G60170.2
Glyur003215s00039011.1 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT2G35920.1
Glyur000074s00005575.1 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT1G48650.2
Glyur000816s00024887.1 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT2G01130.1
Glyur000816s00024887.2 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT2G01130.1
Glyur000683s00025143.1 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT2G30800.1
Glyur000141s00009807.1 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT2G30800.1
Glyur000768s00019897.1 K14442 DHX36, RHAU EC:3.6.4.13 ATP-dependent RNA helicase DHX36 AT5G04895.1
Glyur000180s00014073.1 K01148 PARN EC:3.1.13.4 poly(A)-specific ribonuclease AT3G25440.1
Glyur001337s00036092.1 K01148 PARN EC:3.1.13.4 poly(A)-specific ribonuclease AT3G25430.1
Glyur000027s00001503.1 K01148 PARN EC:3.1.13.4 poly(A)-specific ribonuclease AT1G55870.1
Glyur000844s00023267.1 K12611 DCP1B EC:3.-.-.- mRNA-decapping enzyme 1B AT1G08370.1
Glyur000007s00002829.1 K12611 DCP1B EC:3.-.-.- mRNA-decapping enzyme 1B AT1G08370.1
Glyur000581s00027345.1 K12613 DCP2 EC:3.6.1.62 mRNA-decapping enzyme subunit 2 AT5G13570.1
Glyur000184s00008199.1 K12614 DDX6, RCK, DHH1 EC:3.6.4.13 ATP-dependent RNA helicase DDX6/DHH1 AT4G00660.2
Glyur000003s00001247.1 K12614 DDX6, RCK, DHH1 EC:3.6.4.13 ATP-dependent RNA helicase DDX6/DHH1 AT4G00660.2
Glyur000792s00027613.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur000104s00006042.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur000104s00006042.2 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur000118s00009681.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur006726s00042747.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur010532s00044197.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur000563s00023580.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur000563s00023580.2 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur001081s00024627.1 K12619 XRN2, RAT1 EC:3.1.13.- 5'-3' exoribonuclease 2 AT1G75660.1
Glyur000543s00030818.1 K01689 ENO, eno EC:4.2.1.11 enolase AT1G74030.1
Glyur003570s00039992.1 K01689 ENO, eno EC:4.2.1.11 enolase AT2G36530.1
Glyur003570s00039991.1 K01689 ENO, eno EC:4.2.1.11 enolase AT2G36530.1
Glyur000156s00011995.1 K01689 ENO, eno EC:4.2.1.11 enolase AT2G36530.1
Glyur000156s00011995.3 K01689 ENO, eno EC:4.2.1.11 enolase AT2G36530.1
Glyur000075s00007180.1 K01689 ENO, eno EC:4.2.1.11 enolase AT2G36530.1
Glyur000567s00021960.1 K01689 ENO, eno EC:4.2.1.11 enolase AT2G29560.1
Glyur000591s00018665.1 K00962 pnp, PNPT1 EC:2.7.7.8 polyribonucleotide nucleotidyltransferase AT3G03710.1
Glyur000570s00022980.1 K00962 pnp, PNPT1 EC:2.7.7.8 polyribonucleotide nucleotidyltransferase AT5G14580.1
Glyur000060s00004723.1 K03654 recQ EC:3.6.4.12 ATP-dependent DNA helicase RecQ AT1G60930.1
Glyur000219s00011582.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur001161s00035401.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT2G22480.1
Glyur000011s00000650.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur000011s00000650.2 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur000095s00007028.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT5G61580.1
Glyur000324s00015445.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur000749s00022593.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT2G22480.1
Glyur000753s00021276.1 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur000753s00021276.2 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur000753s00021276.3 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1
Glyur000753s00021276.4 K00850 pfkA, PFK EC:2.7.1.11 6-phosphofructokinase 1 AT4G26270.1


Pathway information

map03018